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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4925162 chr17:18192195 C/T LOC162632 chr17:16614993-16707819:+ 0.38 6.26 8.41E-10 Box Plot
THCA rs4925163 chr17:18195268 T/C LOC162632 chr17:16614993-16707819:+ 0.38 6.26 8.41E-10 Box Plot
THCA rs4925167 chr17:18211205 C/T LOC162632 chr17:16614993-16707819:+ 0.38 6.22 1.11E-9 Box Plot
THCA rs4925169 chr17:18222341 G/A LOC162632 chr17:16614993-16707819:+ 0.37 6.04 3.1E-9 Box Plot
THCA rs4925171 chr17:18226177 G/T LOC162632 chr17:16614993-16707819:+ 0.36 5.88 7.73E-9 Box Plot
THCA rs4925172 chr17:18228605 C/A LOC162632 chr17:16614993-16707819:+ 0.36 6.01 3.67E-9 Box Plot
THCA rs4925179 chr17:18253029 A/T LOC162632 chr17:16614993-16707819:+ 0.35 5.89 7.37E-9 Box Plot
THCA rs4929893 chr11:49196332 C/T FOLH1B chr11:89372395-89431886:+ -0.37 -6.5 2.06E-10 Box Plot
THCA rs4929894 chr11:49196333 G/C FOLH1B chr11:89372395-89431886:+ -0.38 -6.56 1.39E-10 Box Plot
THCA rs4929895 chr11:49205121 G/A FOLH1B chr11:89372395-89431886:+ -0.37 -6.49 2.19E-10 Box Plot
THCA rs493161 chr6:27850714 A/T BTN3A2 chr6:26365387-26378548:+ -0.55 -9.52 8.93E-20 Box Plot
THCA rs493161 chr6:27850714 A/T RNF5P1 chr8:38458179-38458718:- 0.54 6 3.94E-9 Box Plot
THCA rs493161 chr6:27850714 A/T ZFP57 chr6:29640169-29648887:- 0.61 7.21 2.21E-12 Box Plot
THCA rs4932436 chr15:89396676 C/A ALG12 chr22:50293877-50312106:- -0.43 -6.6 1.13E-10 Box Plot
THCA rs4932436 chr15:89396676 C/A NHP2L1 chr22:42069934-42086508:- -0.49 -6.78 3.47E-11 Box Plot